Implement base missing values strategies #3
Merged
bastien.ollier
merged 4 commits from feature/missing-values
into main
10 months ago
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__pycache__
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from abc import ABC, abstractmethod
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from pandas import DataFrame, Series
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from pandas.api.types import is_numeric_dtype
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from typing import Any, Union
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class DataFrameFunction(ABC):
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"""A command that may be applied in-place to a dataframe."""
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@abstractmethod
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def apply(self, df: DataFrame, label: str, series: Series) -> DataFrame:
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"""Apply the current function to the given dataframe, in-place.
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The series is described by its label and dataframe."""
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return df
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class MVStrategy(DataFrameFunction):
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"""A way to handle missing values in a dataframe."""
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@staticmethod
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def list_available(df: DataFrame, series: Series) -> list['MVStrategy']:
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"""Get all the strategies that can be used."""
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choices = [DropStrategy(), ModeStrategy()]
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if is_numeric_dtype(series):
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choices.extend((MeanStrategy(), MedianStrategy(), LinearRegressionStrategy()))
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return choices
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class ScalingStrategy(DataFrameFunction):
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"""A way to handle missing values in a dataframe."""
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@staticmethod
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def list_available(df: DataFrame, series: Series) -> list['MVStrategy']:
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"""Get all the strategies that can be used."""
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choices = [KeepStrategy()]
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if is_numeric_dtype(series):
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choices.extend((MinMaxStrategy(), ZScoreStrategy()))
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if series.sum() != 0:
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choices.append(UnitLengthStrategy())
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return choices
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class DropStrategy(MVStrategy):
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#@typing.override
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def apply(self, df: DataFrame, label: str, series: Series) -> DataFrame:
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df.dropna(subset=label, inplace=True)
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return df
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def __str__(self) -> str:
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return "Drop"
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class PositionStrategy(MVStrategy):
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#@typing.override
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def apply(self, df: DataFrame, label: str, series: Series) -> DataFrame:
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series.fillna(self.get_value(series), inplace=True)
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return df
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@abstractmethod
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def get_value(self, series: Series) -> Any:
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pass
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class MeanStrategy(PositionStrategy):
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#@typing.override
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def get_value(self, series: Series) -> Union[int, float]:
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return series.mean()
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def __str__(self) -> str:
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return "Use mean"
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class MedianStrategy(PositionStrategy):
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#@typing.override
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def get_value(self, series: Series) -> Union[int, float]:
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return series.median()
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def __str__(self) -> str:
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return "Use median"
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class ModeStrategy(PositionStrategy):
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#@typing.override
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def get_value(self, series: Series) -> Any:
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return series.mode()[0]
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def __str__(self) -> str:
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return "Use mode"
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class LinearRegressionStrategy(MVStrategy):
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def apply(self, df: DataFrame, label: str, series: Series) -> DataFrame:
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series.interpolate(inplace=True)
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return df
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def __str__(self) -> str:
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return "Use linear regression"
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class KeepStrategy(ScalingStrategy):
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#@typing.override
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def apply(self, df: DataFrame, label: str, series: Series) -> DataFrame:
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return df
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def __str__(self) -> str:
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return "No-op"
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class MinMaxStrategy(ScalingStrategy):
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#@typing.override
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def apply(self, df: DataFrame, label: str, series: Series) -> DataFrame:
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minimum = series.min()
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maximum = series.max()
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df[label] = (series - minimum) / (maximum - minimum)
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return df
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def __str__(self) -> str:
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return "Min-max"
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class ZScoreStrategy(ScalingStrategy):
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#@typing.override
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def apply(self, df: DataFrame, label: str, series: Series) -> DataFrame:
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df[label] = (series - series.mean()) / series.std()
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return df
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def __str__(self) -> str:
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return "Z-Score"
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class UnitLengthStrategy(ScalingStrategy):
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#@typing.override
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def apply(self, df: DataFrame, label: str, series: Series) -> DataFrame:
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df[label] = series / series.sum()
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return df
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def __str__(self) -> str:
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return "Unit length"
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@ -0,0 +1,32 @@
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import streamlit as st
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from normstrategy import MVStrategy, ScalingStrategy
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if "data" in st.session_state:
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data = st.session_state.original_data
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st.session_state.original_data = data.copy()
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for column, series in data.items():
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col1, col2 = st.columns(2)
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missing_count = series.isna().sum()
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choices = MVStrategy.list_available(data, series)
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option = col1.selectbox(
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f"Missing values of {column} ({missing_count})",
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choices,
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index=1,
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key=f"mv-{column}",
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)
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# Always re-get the series to avoid reusing an invalidated series pointer
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data = option.apply(data, column, data[column])
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choices = ScalingStrategy.list_available(data, series)
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option = col2.selectbox(
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"Scaling",
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choices,
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key=f"scaling-{column}",
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)
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data = option.apply(data, column, data[column])
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st.write(data)
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st.session_state.data = data
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else:
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st.error("file not loaded")
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